do you have a multi meter, fuel pressure gauge, and timing light?
 will need to test for
 injector operation, tps operation, ignition operation, iac operation, fuel pressure, timing, wiring harness, asd relay, might be worth it to also check the gap for the hall effect, test the coil, would also recommend compression testing,
 mark any differences between how the engine runs in neutral and or park, vs. how it runs in gear, to rule out any trans issues.
 when was the last time the injectors were serviced?
 what is the spray pattern? (should be visible with timing light)
 are there any vacuum leaks?
 are all the temp sensors working properly?
 some common areas are the iac motor, injectors, and injector harness.
 with hard numbers for these tests a proper direction can be determined,
 for proper testing procedures I would look at posts from captain obvious, (co as some threads reference him) you could contact him directly, but he has relayed much of this testing info already, so it should be available through the site search function.
 luck with this endeavor and keep us posted.Â